Index

A

A() (scot.connectivity.Connectivity method) absS() (scot.connectivity.Connectivity method) acm() (in module scot.utils)

activate() (in module scot.backend.builtin) (in module scot.backend.sklearn) angle() (eegtopo.geometry.spherical.Circle method) array_project_radial_to3d() (in module eegtopo.projections)

B

binica() (in module scot.builtin.binica)

bootstrap_connectivity() (in module scot.connectivity_statistics)

C

calc_g() (eegtopo.topoplot.Topoplot method) calc_gmap() (eegtopo.topoplot.Topoplot method) calc_legendre_factors() (eegtopo.topoplot.Topoplot static method) cartesian() (in module scot.builtin.utils) cat_trials() (in module scot.datatools) check_binary() (in module scot.builtin.binica) Cinv() (scot.connectivity.Connectivity method) Circle (class in eegtopo.geometry.spherical) circle_intersect_circle() (eegtopo.geometry.spherical.Construct static method) COH() (scot.connectivity.Connectivity method) compare_conditions() (scot.ooapi.Workspace method)

Connectivity (class in scot.connectivity) connectivity() (in module scot.connectivity) Construct (class in eegtopo.geometry.spherical) construct_1020_easycap() (in module eegtopo.eegpos3d) convert_output_() (in module scot.connectivity_statistics) copy() (eegtopo.geometry.euclidean.Vector method) (scot.var.VARBase method) create_map() (eegtopo.topoplot.Topoplot method) cross() (eegtopo.geometry.euclidean.Vector method) cut_segments() (in module scot.datatools) cuthill_mckee() (in module scot.utils)

D

dDTF() (scot.connectivity.Connectivity method) Defaults (class in scot.var) distance() (eegtopo.geometry.spherical.Circle method) (eegtopo.geometry.spherical.Line method) (eegtopo.geometry.spherical.Point method) distances() (eegtopo.geometry.spherical.Point method) do_ica() (scot.ooapi.Workspace method) do_mvarica() (scot.ooapi.Workspace method)

DocStringInheritor (class in scot.utils) DocStringInheritorMeta (class in scot.utils) dot() (eegtopo.geometry.euclidean.Vector method) dot_special() (in module scot.datatools) DTF() (scot.connectivity.Connectivity method)

E

eegtopo.eegpos3d (module) eegtopo.geometry.euclidean (module) eegtopo.geometry.spherical (module)

eegtopo.projections (module) eegtopo.tools (module) eegtopo.topoplot (module)

F

ffDTF() (scot.connectivity.Connectivity method) ffPDC() (scot.connectivity.Connectivity method) fit() (scot.backend.sklearn.VAR method) (scot.builtin.var.VAR method) (scot.var.VARBase method) fit_multiclass() (in module scot.var)

fit_var() (scot.ooapi.Workspace method) fromiterable() (eegtopo.geometry.euclidean.Vector class method) fromvector() (eegtopo.geometry.euclidean.Vector class method) (eegtopo.geometry.spherical.Point class method)

G

G() (scot.connectivity.Connectivity method) GDTF() (scot.connectivity.Connectivity method) get_bootstrap_connectivity() (scot.ooapi.Workspace method) get_connectivity() (scot.ooapi.Workspace method) get_map() (eegtopo.topoplot.Topoplot method)

get_point() (eegtopo.geometry.spherical.Circle method) (eegtopo.geometry.spherical.Line method) get_radius() (eegtopo.geometry.spherical.Circle method) get_surrogate_connectivity() (scot.ooapi.Workspace method) get_tf_connectivity() (scot.ooapi.Workspace method) GPDC() (scot.connectivity.Connectivity method)

H

H() (scot.connectivity.Connectivity method)

I

intersection() (in module eegtopo.eegpos3d)

is_stable() (scot.var.VARBase method)

J

jackknife_connectivity() (in module scot.connectivity_statistics)

K

keys() (eegtopo.tools.Struct method)

L

Line (class in eegtopo.geometry.spherical) line_intersect_circle() (eegtopo.geometry.spherical.Construct static method) line_intersect_line() (eegtopo.geometry.spherical.Construct static method)

loadmat() (in module scot.matfiles) logG() (scot.connectivity.Connectivity method) logS() (scot.connectivity.Connectivity method)

M

memoize (class in scot.utils) midpoint() (eegtopo.geometry.spherical.Construct static method)

multitrial() (in module scot.xvschema) mvarica() (in module scot.varica)

N

norm() (eegtopo.geometry.euclidean.Vector method) norm2() (eegtopo.geometry.euclidean.Vector method)

normalize() (eegtopo.geometry.euclidean.Vector method) normalized() (eegtopo.geometry.euclidean.Vector method)

O

optimize() (scot.builtin.var.VAR method) (scot.var.VARBase method) optimize_delta_bisection() (scot.builtin.var.VAR method)

optimize_var() (scot.ooapi.Workspace method)

P

pca() (in module scot.builtin.pca) pca_eig() (in module scot.builtin.pca) pca_svd() (in module scot.builtin.pca) pCOH() (scot.connectivity.Connectivity method) PDC() (scot.connectivity.Connectivity method) PDCF() (scot.connectivity.Connectivity method) PHI() (scot.connectivity.Connectivity method) plainica() (in module scot.plainica) plot_circles() (eegtopo.topoplot.Topoplot method) plot_circular() (in module scot.plotting) plot_connectivity_significance() (in module scot.plotting) plot_connectivity_spectrum() (in module scot.plotting) plot_connectivity_surrogate() (scot.ooapi.Workspace method) plot_connectivity_timespectrum() (in module scot.plotting)

plot_connectivity_topos() (in module scot.plotting) (scot.ooapi.Workspace method) plot_head() (eegtopo.topoplot.Topoplot method) plot_locations() (eegtopo.topoplot.Topoplot method) plot_map() (eegtopo.topoplot.Topoplot method) plot_source_topos() (scot.ooapi.Workspace method) plot_sources() (in module scot.plotting) plot_topo() (in module scot.plotting) plot_whiteness() (in module scot.plotting) Point (class in eegtopo.geometry.spherical) predict() (scot.var.VARBase method) prepare_topoplots() (in module scot.plotting) project_radial_to2d() (in module eegtopo.projections) project_radial_to3d() (in module eegtopo.projections)

R

randomize_phase() (in module scot.datatools) remove_sources() (scot.ooapi.Workspace method) ResultICA (class in scot.plainica)

rotate() (eegtopo.geometry.euclidean.Vector method) rotated() (eegtopo.geometry.euclidean.Vector method)

S

S() (scot.connectivity.Connectivity method) scot.__init__ (module) scot.backend (module) scot.backend.builtin (module) scot.backend.sklearn (module) scot.backend.sklearn_utils (module) scot.builtin (module) scot.builtin.binica (module) scot.builtin.pca (module) scot.builtin.utils (module) scot.builtin.var (module) scot.config (module) scot.connectivity (module) scot.connectivity_statistics (module) scot.datatools (module) scot.matfiles (module) scot.ooapi (module)

scot.plainica (module) scot.plotting (module) scot.utils (module) scot.var (module) scot.varica (module) scot.xvschema (module) set_data() (scot.ooapi.Workspace method) set_locations() (eegtopo.topoplot.Topoplot method) set_map() (eegtopo.topoplot.Topoplot method) set_used_labels() (scot.ooapi.Workspace method) set_values() (eegtopo.topoplot.Topoplot method) show_plots() (in module scot.plotting) (scot.ooapi.Workspace static method) significance_fdr() (in module scot.connectivity_statistics) simulate() (scot.var.VARBase method) singletrial() (in module scot.xvschema) Struct (class in eegtopo.tools) surrogate_connectivity() (in module scot.connectivity_statistics)

T

test_bootstrap_difference() (in module scot.connectivity_statistics) test_rank_difference_a() (in module scot.connectivity_statistics) test_whiteness() (in module scot.var) (scot.var.VARBase method)

Topoplot (class in eegtopo.topoplot) topoplot() (in module eegtopo.topoplot)

V

VAR (class in scot.backend.sklearn) (class in scot.builtin.var) VARBase (class in scot.var)

Vector (class in eegtopo.geometry.euclidean) vector (eegtopo.geometry.spherical.Point attribute)

W

Workspace (class in scot.ooapi) wrapper_binica() (in module scot.backend.builtin)

wrapper_fastica() (in module scot.backend.sklearn) wrapper_pca() (in module scot.backend.builtin) (in module scot.backend.sklearn)

X

xvschema() (scot.var.Defaults method)